3Q04
Crystal structure of the apo-form of human CK2 alpha at pH 8.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97625 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.686, 46.065, 63.675 |
Unit cell angles | 90.00, 111.51, 90.00 |
Refinement procedure
Resolution | 59.230 - 1.800 |
R-factor | 0.1645 |
Rwork | 0.162 |
R-free | 0.21630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pvr |
RMSD bond length | 0.024 |
RMSD bond angle | 1.915 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.25) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.240 | 59.240 | 1.900 |
High resolution limit [Å] | 1.800 | 5.690 | 1.800 |
Rmerge | 0.067 | 0.027 | 0.397 |
Rmeas | 0.032 | 0.467 | |
Rpim | 0.018 | 0.245 | |
Total number of observations | 3105 | 15136 | |
Number of reflections | 29505 | ||
<I/σ(I)> | 17.5 | 36.8 | 5.3 |
Completeness [%] | 99.7 | 94.8 | 99.8 |
Redundancy | 3.5 | 3.3 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 30% PEG 4000, 0.2M lithium sulfate, 0.1M TrisHCl, pH 8.5, vapor diffusion, sitting drop, temperature 293K |