3PW3
Crystal structure of a cysteine protease (BDI_2249) from Parabacteroides distasonis ATCC 8503 at 2.23 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-24 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.592, 137.810, 223.165 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.966 - 2.230 |
R-factor | 0.1603 |
Rwork | 0.159 |
R-free | 0.18120 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.237 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.6.0093) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.966 | 29.966 | 2.310 |
High resolution limit [Å] | 2.230 | 4.780 | 2.230 |
Rmerge | 0.073 | 0.031 | 0.534 |
Number of reflections | 154800 | 29501 | 30326 |
<I/σ(I)> | 13.23 | 32.5 | 2.6 |
Completeness [%] | 98.7 | 95.5 | 99.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.2 | 293 | 20.00% polyethylene glycol 3350, 0.2000M potassium sodium tartrate, No Buffer pH 7.2, Additive: 0.001 M zinc chloride, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |