3PVA
PENICILLIN V ACYLASE FROM B. SPHAERICUS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 120 |
Spacegroup name | P 1 |
Unit cell lengths | 47.400, 129.600, 156.700 |
Unit cell angles | 88.30, 83.40, 84.60 |
Refinement procedure
Resolution | 14.000 - 2.800 |
R-factor | 0.211 * |
Rwork | 0.211 |
R-free | 0.24300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | REFINED STRUCTURE FROM HEXAGONAL FORM |
RMSD bond length | 0.020 |
RMSD bond angle | 0.040 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 18.000 |
High resolution limit [Å] | 2.800 |
Rmerge | 0.053 |
Total number of observations | 111412 * |
Number of reflections | 77056 |
<I/σ(I)> | 11.2 |
Completeness [%] | 85.0 |
Redundancy | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.4 | 5MM DTT, 30% AS, 1% SUCROSE, 0.2M NA PHOSPHATE, PH 6.4 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | sodium phosphate | 0.1 (M) | pH6.4 |
2 | 1 | reservoir | dithiothreitol | 3 (mM) | |
3 | 1 | reservoir | ammonium sulfate | ||
4 | 1 | reservoir | sucrose solution | 0.9 (%(w/v)) | |
5 | 1 | drop | protain | 15 (mg/ml) | |
6 | 1 | drop | sodium phosphate | 0.2 (M) |