3PRG
LIGAND BINDING DOMAIN OF HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Collection date | 1998-06-22 |
Detector | RIGAKU |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 67.250, 67.250, 156.880 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 2.900 |
R-factor | 0.209 |
Rwork | 0.209 |
R-free | 0.27100 |
Structure solution method | MIRAS |
RMSD bond length | 0.007 |
RMSD bond angle | 19.000 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS (0.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.070 * | |
Number of reflections | 8069 | |
<I/σ(I)> | 11 | 1.8 |
Completeness [%] | 96.0 | 98 |
Redundancy | 2.3 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 9.5 | pH 9.50 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 3 (mg/ml) | |
2 | 1 | reservoir | sodium formate | 3.4 (M) | |
3 | 1 | reservoir | Tris-HCl | 0.1 (M) | |
4 | 1 | reservoir | PEG6000 | 1 (%) |