3PMT
Crystal structure of the Tudor domain of human Tudor domain-containing protein 3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-01-12 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 65 |
Unit cell lengths | 41.682, 41.682, 59.947 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.690 - 1.800 |
R-factor | 0.1789 |
Rwork | 0.177 |
R-free | 0.20890 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.161 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (refmac_5.6.0081) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.840 |
High resolution limit [Å] | 1.800 | 4.440 | 1.800 |
Rmerge | 0.031 | 0.021 | 0.099 |
Number of reflections | 5478 | ||
<I/σ(I)> | 35.4 | ||
Completeness [%] | 98.7 | 99 | 85.8 |
Redundancy | 19.5 | 21 | 8.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 0.1M Tris-HCl pH 8.5, 2.0M Ammonium sulfate, VAPOR DIFFUSION, SITTING DROP, temperature 291K |