3PAR
Surfactant Protein-A neck and carbohydrate recognition domain (NCRD) in the absence of ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 90 |
Detector technology | IMAGE PLATE |
Collection date | 2006-07-07 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 63 |
Unit cell lengths | 98.351, 98.351, 44.744 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.190 - 2.300 |
R-factor | 0.227 |
Rwork | 0.227 |
R-free | 0.23800 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | PDB CODE 1R13 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.200 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.350 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.039 | 0.266 |
Number of reflections | 10984 | |
<I/σ(I)> | 21.9 | 4.3 |
Completeness [%] | 98.2 | 91.3 |
Redundancy | 4 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 290 | 1 ul of SP-A (10 mg/ml) was mixed with 1 ul reservoir (50 mM sodium cacodylate (pH = 6.5), 1.2-1.6 M lithium sulfate, and 10 mM calcium chloride). After crystals had grown, the drop was diluted 1/2 with 50 mM sodium cacodylate (pH = 6.5) and 10 mM calcium chloride. Maltose powder was then added to the drop and dissolved. Prior to data collection, the drop was diluted 1/2 again and more maltose powder was dissolved., VAPOR DIFFUSION, HANGING DROP, temperature 290K |