3PAB
Crystal Structure of H2-Kb in complex with a mutant of the chicken ovalbumin epitope OVA-E1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-03-27 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.954 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.683, 88.818, 89.121 |
Unit cell angles | 90.00, 111.38, 90.00 |
Refinement procedure
Resolution | 42.365 - 2.200 |
R-factor | 0.1963 |
Rwork | 0.193 |
R-free | 0.26000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vac |
RMSD bond length | 0.007 |
RMSD bond angle | 1.116 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.300 | |
High resolution limit [Å] | 2.200 | 10.000 | 2.200 |
Rmerge | 0.094 | 0.041 | 0.380 |
Rmeas | 0.043 | 0.400 | |
Number of reflections | 49257 | 549 | 6155 |
<I/σ(I)> | 18.49 | 47 | 5.9 |
Completeness [%] | 99.9 | 98.9 | 100 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 0.2M calcium acetate, 15% PEG 8K, 0.1M Na-malonate, pH 6, vapor diffusion, hanging drop, temperature 277K |