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3P5E

Structure of the carbohydrate-recognition domain of human Langerin with man4 (Man alpha1-3(Man alpha1-6)Man alpha1-6Man)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2010-03-31
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.97945
Spacegroup nameP 42
Unit cell lengths79.310, 79.310, 89.580
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.650 - 1.701
R-factor0.175
Rwork0.173
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.083
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.6.1_357))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.7901.790
High resolution limit [Å]1.7001.700
Rmerge0.0630.400
Number of reflections60951
<I/σ(I)>20.34.9
Completeness [%]100.0100
Redundancy7.67.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7295protein solution: 5 mg/mL langerin CRD, 2.5 mM CaCl2, 10 mM Tris pH 8.0, 25 mM NaCl and 10 mM Man4. reservoir solution: 0.1 M Hepes pH 7.0, 0.25 M MgCl2 and 31% polyethylene glycol 4000, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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