3P2Y
Crystal structure of alanine dehydrogenase/pyridine nucleotide transhydrogenase from Mycobacterium smegmatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-08-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97946 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 89.760, 89.760, 179.570 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.150 - 1.820 |
R-factor | 0.1665 |
Rwork | 0.165 |
R-free | 0.19630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1l7d |
RMSD bond length | 0.015 |
RMSD bond angle | 1.428 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.870 | |
High resolution limit [Å] | 1.820 | 8.140 | 1.820 |
Rmerge | 0.052 | 0.026 | 0.234 |
Number of reflections | 38305 | 537 | 2309 |
<I/σ(I)> | 42.32 | 83.8 | 11.1 |
Completeness [%] | 97.8 | 98.4 | 81.2 |
Redundancy | 17.3 | 14.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | 21.6 mg/mL MysmA.00681.a.A1 PS00596 against PACT screen condition C11 20% PEG 6000, 0.1 M Hepes pH 7.0, 0.2 M CaCl2, cryo-protected with 25% ethylene glycol, crystal tracking ID 215904c11, VAPOR DIFFUSION, SITTING DROP, temperature 289K |