3P1H
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23K/I92A at cryogenic temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-01 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97950 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 31.131, 60.448, 37.972 |
Unit cell angles | 90.00, 93.56, 90.00 |
Refinement procedure
Resolution | 22.940 - 1.790 |
R-factor | 0.1841 |
Rwork | 0.179 |
R-free | 0.23070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ID: 3BDC Residues 7-141 deleted waters and cofactors all B factors set to 20.00 A2 truncated: H8A T13A V23A Q30A K64A T82A I92A Y113A V114A Y115A |
RMSD bond length | 0.014 |
RMSD bond angle | 1.499 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.820 |
High resolution limit [Å] | 1.790 | 4.860 | 1.790 |
Rmerge | 0.075 | 0.055 | 0.280 |
Number of reflections | 13067 | ||
<I/σ(I)> | 14.7 | ||
Completeness [%] | 98.0 | 89.9 | 97 |
Redundancy | 11.8 | 9.9 | 12.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 277 | 27% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |