3P1G
Crystal Structure of the Xenotropic Murine Leukemia Virus-Related Virus (XMRV) RNase H Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Detector technology | CCD |
Collection date | 2010-09-24 |
Detector | NOIR-1 |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 |
Unit cell lengths | 37.530, 37.530, 100.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.530 - 1.500 |
R-factor | 0.163 |
Rwork | 0.161 |
R-free | 0.18200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.995 |
Data scaling software | d*TREK (9.7L) |
Phasing software | PHASER |
Refinement software | PHENIX (1.6.4_486) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.530 | 37.530 | 1.550 |
High resolution limit [Å] | 1.500 | 3.230 | 1.500 |
Rmerge | 0.098 | 0.050 | 0.771 |
Number of reflections | 22272 | ||
<I/σ(I)> | 7.8 | 24.2 | 2.1 |
Completeness [%] | 99.9 | 99.8 | 99.3 |
Redundancy | 6.77 | 7.36 | 3.66 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.7 | 291 | PEG 1500, Magnesium Chloride, Sodium Citrate, pH 4.7, Vapor Diffusion, Hanging Drop, temperature 291K |