3ONY
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with Fucose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2010-04-08 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 80.529, 115.905, 267.801 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.666 - 1.850 |
R-factor | 0.1652 |
Rwork | 0.164 |
R-free | 0.18930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ID: 3ONU |
RMSD bond length | 0.007 |
RMSD bond angle | 1.041 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.6.4_486)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.589 | |
Number of reflections | 105679 | |
<I/σ(I)> | 2.2 | |
Completeness [%] | 99.1 | 93.3 |
Redundancy | 6.8 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.66M ammonium citrate pH 6.5, 1.65% isopropanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K |