3ONN
Crystal structure of 5'-nucleotidase SDT1 from saccharomyces cerevisiae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2009-01-02 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.720, 77.550, 82.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.775 - 1.870 |
R-factor | 0.2004 |
Rwork | 0.198 |
R-free | 0.24980 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.038 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | PHENIX ((phenix.refine: 1.6_289)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.720 | 1.960 |
High resolution limit [Å] | 1.860 | 1.860 |
Rmerge | 0.071 | 0.470 |
Number of reflections | 22261 | |
<I/σ(I)> | 21.2 | 4.7 |
Completeness [%] | 98.5 | 89.8 |
Redundancy | 8.9 | 8.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 287 | 30% PEG 4000, 0.1M Tris-HCl buffer, pH 8.5, 0.2M sodium acetate, VAPOR DIFFUSION, HANGING DROP, temperature 287.0K |