3OH3
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE -Arabinose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-22 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9184 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 107.161, 122.508, 61.061 |
Unit cell angles | 90.00, 105.30, 90.00 |
Refinement procedure
Resolution | 27.173 - 2.030 |
R-factor | 0.177 |
Rwork | 0.176 |
R-free | 0.20420 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3ogz |
RMSD bond length | 0.004 |
RMSD bond angle | 0.893 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | PHENIX (1.6.1_357) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.090 |
High resolution limit [Å] | 2.030 | 4.350 | 2.030 |
Rmerge | 0.037 | 0.019 | 0.496 |
Number of reflections | 48590 | ||
<I/σ(I)> | 17.7 | ||
Completeness [%] | 99.8 | 98.1 | 99.8 |
Redundancy | 4.5 | 4.4 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.1-0.2 M sodium tartrate, 16-20% PEG5000, 10 mM DTT, pH 7-8, vapor diffusion, sitting drop, temperature 292K |