3OH1
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE-Galacturonic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-22 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9184 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 108.226, 122.320, 61.221 |
Unit cell angles | 90.00, 105.42, 90.00 |
Refinement procedure
Resolution | 29.509 - 2.180 |
R-factor | 0.2017 |
Rwork | 0.200 |
R-free | 0.24330 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3ogz |
RMSD bond length | 0.013 |
RMSD bond angle | 1.376 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | PHENIX (1.6.1_357) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.260 |
High resolution limit [Å] | 2.180 | 4.700 | 2.180 |
Rmerge | 0.042 | 0.024 | 0.301 |
Number of reflections | 39879 | ||
<I/σ(I)> | 19.8 | ||
Completeness [%] | 99.5 | 96.3 | 100 |
Redundancy | 6.3 | 6.1 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.1-0.2 M sodium tartrate, 16-20% PEG5000, 10 mM DTT, pH 7-8, vapor diffusion, sitting drop, temperature 292K |