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3O69

Structure of the E100A E.coli GDP-mannose hydrolase (yffh) in complex with Mg++

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E DW
Temperature [K]100
Detector technologyCCD
Collection date2009-08-18
DetectorRIGAKU SATURN 944+
Wavelength(s)1.54
Spacegroup nameP 21 21 21
Unit cell lengths60.379, 69.260, 98.554
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution22.810 - 2.100
R-factor0.2084
Rwork0.205
R-free0.27960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3o52
RMSD bond length0.011
RMSD bond angle1.262
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]22.81050.0002.180
High resolution limit [Å]2.1004.5202.100
Rmerge0.0890.0490.331
Number of reflections23871
<I/σ(I)>12.8
Completeness [%]96.098.475.1
Redundancy5.65.83.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529120-26% PEG 3350, 0.2 M Mg Cl, 0.1 M Tris HCL pH 8.5, 4mM GDP-mannose at a ratio of 1:1 protein:reservoir, vapor diffusion, hanging drop, temperature 291K

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