3O44
Crystal Structure of the Vibrio cholerae Cytolysin (HlyA) Heptameric Pore
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-01-01 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.25499, 1.25462, 1.03317 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 172.354, 182.859, 430.395 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.956 - 2.880 |
R-factor | 0.2192 |
Rwork | 0.218 |
R-free | 0.24860 |
Structure solution method | MAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.053 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELX |
Refinement software | PHENIX (1.5_2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 3.000 |
High resolution limit [Å] | 2.880 | 6.250 | 2.880 |
Rmerge | 0.096 | 0.035 | 0.505 |
Number of reflections | 299154 | ||
<I/σ(I)> | 8.3 | ||
Completeness [%] | 98.9 | 96.9 | 96.3 |
Redundancy | 4.6 | 4.5 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 293 | 20 mM HEPES, 10% PEG 2000, 20 mM Cobalt(III) Hexammine Choride, 1 mM C10E8, pH 7.6, vapor diffusion, hanging drop, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 293 | 20 mM HEPES, 10% PEG 2000, 20 mM Cobalt(III) Hexammine Choride, 1 mM C10E8, pH 7.6, vapor diffusion, hanging drop, temperature 293K |