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3NXW

Crystal structure of Staphylococcal nuclease variant Delta+PHS L125A at cryogenic temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
Collection date2010-01-25
DetectorADSC QUANTUM 315
Wavelength(s)1.0000
Spacegroup nameP 1 21 1
Unit cell lengths30.947, 60.640, 38.177
Unit cell angles90.00, 92.54, 90.00
Refinement procedure
Resolution30.920 - 1.650
R-factor0.193
Rwork0.188
R-free0.23780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3BDC with all H2Os Ca2+ and THP removed and the following truncations: H8A T13A Q30A K64A Q80 T82A M98A Y113A V114A Y115A K116A L125A Q131A K134A K136A; all b-factors were reset to 20 A2.
RMSD bond length0.017
RMSD bond angle1.633
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.680
High resolution limit [Å]1.6504.4801.650
Rmerge0.0570.0490.207
Number of reflections17169
<I/σ(I)>20.3
Completeness [%]99.498.293.9
Redundancy8.27.75.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP927729% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, vapor diffusion, hanging drop, temperature 277K

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