3NX5
The crystal structure of Sanguinarine bound to DNA d(CGTACG)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-02-08 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9763 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 29.992, 29.992, 119.069 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.690 - 2.310 |
R-factor | 0.2552 |
Rwork | 0.252 |
R-free | 0.28330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3np6 |
RMSD bond length | 0.010 |
RMSD bond angle | 2.403 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.690 | 39.690 | 2.430 |
High resolution limit [Å] | 2.290 | 6.790 | 2.290 |
Rmerge | 0.051 | 0.040 | 0.112 |
Rmeas | 0.046 | 0.133 | |
Number of reflections | 3006 | 112 | 400 |
<I/σ(I)> | 20.99 | 25.2 | 6.5 |
Completeness [%] | 96.3 | 75.7 | 85.1 |
Redundancy | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 296 | MPD, MgCl2, NaCl, pH 6.5, vapor diffusion, temperature 296K |