3NQT
Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A at cryogenic temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-01-25 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.1000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 30.963, 60.654, 38.553 |
Unit cell angles | 90.00, 93.30, 90.00 |
Refinement procedure
Resolution | 30.910 - 1.900 |
R-factor | 0.1921 |
Rwork | 0.186 |
R-free | 0.24590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3BDC with all H2Os Ca2+ and THP removed and the following truncations: H8A T13A Q30A K64A V66A T82A Y113A V114A Y115A; all b-factors were reset to 20 A^2. |
RMSD bond length | 0.013 |
RMSD bond angle | 1.459 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.3) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.061 | 0.038 | 0.303 |
Number of reflections | 11275 | ||
<I/σ(I)> | 16.8 | ||
Completeness [%] | 99.5 | 93.6 | 100 |
Redundancy | 7.1 | 6.8 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 28% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K |