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3N1B

C-terminal domain of Vps54 subunit of the GARP complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Detector technologyCCD
DetectorADSC QUANTUM 315r
Wavelength(s)1.700
Spacegroup nameC 1 2 1
Unit cell lengths125.862, 30.323, 88.953
Unit cell angles90.00, 120.50, 90.00
Refinement procedure
Resolution30.976 - 2.398
R-factor0.241
Rwork0.239
R-free0.28700
Structure solution methodMAD
RMSD bond length0.002
RMSD bond angle0.547
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareRESOLVE (2.13)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.490
High resolution limit [Å]2.3985.1702.400
Rmerge0.0660.0610.200
Number of reflections11565
<I/σ(I)>18.4
Completeness [%]98.498.690.3
Redundancy3.33.32.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.527723% PEG3350, 0.1M BisTris, 0.1M I3C, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
1VAPOR DIFFUSION, HANGING DROP8.527723% PEG3350, 0.1M BisTris, 0.1M I3C, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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PDB entries from 2024-05-15

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