3MGM
Crystal structure of human NUDT16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS VII |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.412, 79.153, 97.422 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.355 - 1.801 |
R-factor | 0.1847 |
Rwork | 0.184 |
R-free | 0.20050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1u20 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.862 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.042 | 0.323 |
Number of reflections | 32018 | |
<I/σ(I)> | 39.8 | 7.75 |
Completeness [%] | 98.2 | 96.7 |
Redundancy | 7.2 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 1M imidazole, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K |