3MCP
Crystal structure of Glucokinase (BDI_1628) from Parabacteroides distasonis ATCC 8503 at 3.00 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-30 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91162,0.97911 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 80.732, 80.732, 142.581 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.748 - 3.000 |
R-factor | 0.209 |
Rwork | 0.206 |
R-free | 0.24900 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 0.919 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.748 | 28.750 | 3.080 |
High resolution limit [Å] | 3.000 | 13.420 | 3.000 |
Rmerge | 0.130 | 0.046 | 0.716 |
Total number of observations | 703 | 5232 | |
Number of reflections | 10015 | ||
<I/σ(I)> | 14.8 | 13 | 1.1 |
Completeness [%] | 99.9 | 90.6 | 100 |
Redundancy | 7 | 5.2 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 277 | 10.0000% Glycerol, 3.6000M NaFormate, No Buffer pH 7.3, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |