3MAT
E.COLI METHIONINE AMINOPEPTIDASE TRANSITION-STATE INHIBITOR COMPLEX
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU200 |
| Temperature [K] | 298 |
| Detector technology | IMAGE PLATE |
| Collection date | 1998-05-21 |
| Detector | RIGAKU RAXIS IV |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 39.297, 65.155, 51.371 |
| Unit cell angles | 90.00, 106.12, 90.00 |
Refinement procedure
| Resolution | 37.800 - 2.100 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2mat |
| RMSD bond length | 0.013 |
| RMSD bond angle | 2.300 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | TNT (5F PRERELEASE) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 37.800 | 2.180 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.076 * | 0.255 * |
| Total number of observations | 45928 * | |
| Number of reflections | 13762 | |
| <I/σ(I)> | 20.5 | 4.9 |
| Completeness [%] | 94.0 | 92.9 |
| Redundancy | 3.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, sitting drop * | 6.1 | CRYSTALS OF THE CO(II)-SUBSTITUTED ENZYME WERE GROWN AT ROOM TEMPERATURE BY VAPOR DIFFUSION IN 20-30 UL SITTING DROPS AFTER MIXING THE PROTEIN, 12 MG/ML SOLUTION IN STORAGE BUFFER(25 MM HEPES PH 6.8, 25 MM K2SO4, 100 MM NACL, 1 MM COCL2, 15 MM METHIONINE),CONTAINING 48.8 MM N-OCTANOYL SUCROSE, 1:1 WITH WELL SOLUTIONS (24-26% PEG4000, 0.1M HEPES PH7.0-7.2,FRESH 2 MM COCL2). CRYSTALS WERE OBTAINED OF THE INHIBITOR COMPLEX BY INCUBATING THE PROTEIN AS ABOVE AT ROOM TEMPERATURE FOR 5 MIN WITH A 20-FOLD MOLAR EXCESS OF THE INHIBITOR DISSOLVED IN DMSO. THE FINAL INHIBITOR:ENZYME RATIO WAS 10:1 (1% DMSO) AFTER MIXING THE PREFORMED COMPLEX WITH WELL SOLUTION (0.1M MES PH 6.1, |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | MES | 0.1 (M) | |
| 2 | 1 | reservoir | 2 (mM) | ||
| 3 | 1 | reservoir | PEG4000 | 27-31 (%) | |
| 4 | 1 | drop | protein | 12 (mg/ml) | |
| 5 | 1 | drop | N-octanoyl sucrose | 48.8 (mM) |






