3L77
X-ray structure alcohol dehydrogenase from archaeon Thermococcus sibiricus complexed with 5-hydroxy-NADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2009-05-27 |
Detector | MAR555 FLAT PANEL |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 55.620, 83.230, 120.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.670 - 1.550 |
R-factor | 0.134 |
Rwork | 0.133 |
R-free | 0.18000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB CODE 2JAP |
RMSD bond length | 0.006 |
RMSD bond angle | 1.186 |
Refinement software | PHENIX (1.6_289) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.600 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.102 | 0.775 |
Number of reflections | 35365 | |
<I/σ(I)> | 18.45 | 2.27 |
Completeness [%] | 87.3 | 78.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | 293 | The reservoir solutions consisted of 0.1M Hepes pH 7.5, 0.2M sodium chloride, 25% w/v PEG 3350. The crystallization drop contained 2 μl of TsAdh319 solution (10 mg/ml) in 25 мМ Tris-HCl and 300 мМ NaCl, рН 7.5, and 2 μl reservoir solution. Crystals of dimensions 0.4 x 0.1 x 0.06 mm were obtained after 3-4 weeks. VAPOR DIFFUSION, HANGING DROP, temperature 293K |