3L1Y
Crystal structure of human UBC4 E2 conjugating enzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | OTHER |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2006-03-15 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.230, 59.120, 45.240 |
Unit cell angles | 90.00, 106.73, 90.00 |
Refinement procedure
Resolution | 43.310 - 1.600 |
R-factor | 0.18918 |
Rwork | 0.187 |
R-free | 0.22900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1x23 |
RMSD bond length | 0.023 |
RMSD bond angle | 2.018 |
Data reduction software | CrystalClear |
Data scaling software | CrystalClear |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0063) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.310 | 1.640 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.061 | 0.123 |
Number of reflections | 17905 | |
<I/σ(I)> | 17.14 | 13.15 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 3.7 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 295 | 2M sodium formate, 0.1M sodium acetate trihydrate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K |