Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KO9

DTD from Plasmodium falciparum in complex with D-Arginine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2008-10-13
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths52.252, 54.863, 92.419
Unit cell angles106.94, 101.63, 94.49
Refinement procedure
Resolution30.000 - 2.750
R-factor0.205
Rwork0.201
R-free0.27500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PfDTD-Iodide model (not deposited)
RMSD bond length0.010
RMSD bond angle1.282
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.850
High resolution limit [Å]2.7502.750
Rmerge0.0530.521
Number of reflections24028
<I/σ(I)>14.1
Completeness [%]97.394.3
Redundancy3.93.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29325% PEG 1500, VAPOR DIFFUSION, HANGING DROP, temperature 293K

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon