3KDW
Crystal structure of Putative sugar binding protein (YP_001300177.1) from Bacteroides vulgatus ATCC 8482 at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-07-08 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837,0.97929 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 75.303, 75.303, 87.128 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.490 - 1.700 |
R-factor | 0.154 |
Rwork | 0.152 |
R-free | 0.19100 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.518 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SOLVE |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.490 | 28.490 | 1.760 |
High resolution limit [Å] | 1.700 | 3.660 | 1.700 |
Rmerge | 0.040 | 0.019 | 0.550 |
Number of reflections | 31900 | 6080 | 5898 |
<I/σ(I)> | 16.69 | 48.6 | 2 |
Completeness [%] | 99.5 | 99.4 | 98 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2000M (NH4)2HPO4, 50.0000% MPD, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |