Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KBW

Room temperature X-ray mixed-metal structure of D-Xylose Isomerase in complex with Ni(2+) and Mg(2+) co-factors

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date2008-08-26
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameI 2 2 2
Unit cell lengths93.972, 99.701, 102.855
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 1.600
R-factor0.1192
R-free0.16650
Structure solution methodAB INITIO
RMSD bond length0.012
RMSD bond angle0.029
Data reduction softwareCrystalClear
Data scaling softwareCrystalClear
Phasing softwareSHELX
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]10.0001.650
High resolution limit [Å]1.6001.600
Number of reflections50014
Completeness [%]80.095
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1batch7.729040mg/ml protein, 2mM NiCl2, 2mM MgCl2, 30% (v/v) ammonium sulfate (sat.), pH 7.7, batch, temperature 290K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon