3KBL
Crystal structure of the GLD-1 homodimerization domain from Caenorhabditis elegans N169A mutant at 2.28 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Detector technology | CCD |
Collection date | 2008-12-07 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.406, 42.300, 156.144 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.192 - 2.280 |
R-factor | 0.199 |
Rwork | 0.195 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | CS-Rosetta model of wildtype construct with sidechain of N169 changed to A to account for mutation |
RMSD bond length | 0.008 |
RMSD bond angle | 1.011 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.320 |
High resolution limit [Å] | 2.280 | 2.280 |
Rmerge | 0.066 | 0.283 |
Number of reflections | 11001 | |
<I/σ(I)> | 12.1 | 4.37 |
Completeness [%] | 99.4 | 94.1 |
Redundancy | 7.4 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 295 | MES-Na, PEG 200, PEG 3000, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K |