3K94
Crystal Structure of Thiamin pyrophosphokinase from Geobacillus thermodenitrificans, Northeast Structural Genomics Consortium Target GtR2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-03 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9787 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.422, 73.652, 82.657 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.353 - 2.101 |
R-factor | 0.1802 |
Rwork | 0.177 |
R-free | 0.24170 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.077 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.5_2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.092 | 0.419 |
Number of reflections | 46746 | |
<I/σ(I)> | 15.5 | 3.85 |
Completeness [%] | 99.6 | 100 |
Redundancy | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | microbatch under oil | 4.2 | 293 | Protein solution: 100mM NaCl, 5mM DTT, 0.02% NaN3, 10mM Tris-HCl (pH 7.5) . Reservoir solution: 0.1M Na-citrate, 0.1M (NH4)2HPO4, 20% PEG 4000, microbatch under oil, temperature 293K |