Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3K6D

Crystal structure of Xenopus laevis T-cadherin EC1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)0.9791
Spacegroup nameI 41 2 2
Unit cell lengths78.910, 78.910, 62.577
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.902 - 1.800
R-factor0.227
Rwork0.227
R-free0.28500
Structure solution methodSAD
RMSD bond length0.017
RMSD bond angle1.916
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareSOLVE
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.900
High resolution limit [Å]1.8001.800
Rmerge0.0390.209
Number of reflections17500
<I/σ(I)>113.6
Completeness [%]99.9100
Redundancy13.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP727750mM Zn acetate, 20 % PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon