Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3K1Z

Crystal Structure of Human Haloacid Dehalogenase-like Hydrolase Domain containing 3 (HDHD3)

Experimental procedure
Experimental methodSAD
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyCCD
Collection date2009-09-07
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.9773, 0.9796
Spacegroup nameP 21 21 21
Unit cell lengths51.625, 62.455, 79.665
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.320 - 1.550
R-factor0.16935
Rwork0.167
R-free0.20688
Structure solution methodSAD
RMSD bond length0.013
RMSD bond angle1.443
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareSHELXCD
Refinement softwareREFMAC (5.5.0089)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.3201.630
High resolution limit [Å]1.5501.550
Rmerge0.0600.552
Number of reflections37908
<I/σ(I)>11.52
Completeness [%]99.498.7
Redundancy4.13.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.49M NaH2PO4, 0.91M K2HPO4, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon