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3K1F

Crystal structure of RNA Polymerase II in complex with TFIIB

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)0.9340
Spacegroup nameC 2 2 21
Unit cell lengths220.970, 408.270, 275.240
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.690 - 4.300
R-factor0.221
Rwork0.220
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)First 12-subunit RNA Polymerase II from PDB entry 3HOU
RMSD bond length0.009
RMSD bond angle1.160
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareBUSTER (2.7.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0004.300
High resolution limit [Å]4.3004.300
Number of reflections83919
<I/σ(I)>11.52
Completeness [%]99.398.2
Redundancy4.74.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298800 mM sodium ammonium tartrate, 100 mM HEPES pH 7.5, 5 mM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-01

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