3JXY
Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing a GT Mismatch
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2007-11-11 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | .97850 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 38.200, 93.594, 48.118 |
| Unit cell angles | 90.00, 112.60, 90.00 |
Refinement procedure
| Resolution | 28.164 - 1.500 |
| R-factor | 0.1326 |
| Rwork | 0.130 |
| R-free | 0.17350 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB 3JX7 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.986 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 35.300 | 1.550 |
| High resolution limit [Å] | 1.500 | 1.500 |
| Number of reflections | 46379 | |
| <I/σ(I)> | 22 | 4.9 |
| Completeness [%] | 93.2 | 87.2 |
| Redundancy | 3.8 | 3.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 294 | 0.1 M BisTris pH 5.5, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 294K |
