3JS4
Crystal structure of iron superoxide dismutase from Anaplasma phagocytophilum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-08-28 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 |
Unit cell lengths | 45.660, 66.600, 85.440 |
Unit cell angles | 102.09, 104.83, 88.58 |
Refinement procedure
Resolution | 40.000 - 1.950 |
R-factor | 0.169 |
Rwork | 0.167 |
R-free | 0.20600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1unf |
RMSD bond length | 0.013 |
RMSD bond angle | 1.222 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.000 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.036 | 0.203 |
Number of reflections | 63217 | 4284 |
<I/σ(I)> | 14.37 | 2.6 |
Completeness [%] | 91.1 | 83.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | PACT screen condition E1, 20% PEG 3350, 0.2 M NaF. 0.4/0.4 microliter drops. 30.0 mg/mL protein in 25 mM Hepes pH 7.0, 0.3 M NaCl, 10% Glycerol, 2 mM DTT. Crystal tracking ID 204869e1, expression tag not removed prior to crystallization, VAPOR DIFFUSION, SITTING DROP, temperature 289K |