3IWY
Crystal structure of human MDM2 complexed with D-peptide (12 residues)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2009-02-24 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 33.569, 46.503, 49.353 |
Unit cell angles | 90.00, 92.35, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.930 |
R-factor | 0.21258 |
Rwork | 0.210 |
R-free | 0.25856 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eqs |
RMSD bond length | 0.019 |
RMSD bond angle | 1.899 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0070) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.280 | 1.960 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.117 | 0.471 |
Number of reflections | 11041 | |
<I/σ(I)> | 10.8 | 1.9 |
Completeness [%] | 90.3 | |
Redundancy | 3 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 273 | 0.05 M potassium phosphate monobasic, 20% PEG 8,000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 273K |