3IWR
Crystal structure of class I chitinase from Oryza sativa L. japonica
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-07-20 |
Detector | RIGAKU JUPITER 210 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 65 |
Unit cell lengths | 117.082, 117.082, 77.971 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 101.530 - 2.570 |
R-factor | 0.18161 |
Rwork | 0.179 |
R-free | 0.23609 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dkv |
RMSD bond length | 0.015 |
RMSD bond angle | 1.398 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 101.530 | 2.640 |
High resolution limit [Å] | 2.570 | 2.570 |
Rmerge | 0.060 | 0.221 |
Number of reflections | 17963 | |
<I/σ(I)> | 10.5 | 3.2 |
Completeness [%] | 97.0 | 79.4 |
Redundancy | 9.5 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 11%(w/v) PEG 20000, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |