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3ITP

Crystal structure of Staphylococcal nuclease variant Delta+PHS F34K at cryogenic temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
Collection date2009-08-20
DetectorADSC QUANTUM 315
Wavelength(s)0.97950
Spacegroup nameP 1 21 1
Unit cell lengths31.027, 60.296, 38.249
Unit cell angles90.00, 92.26, 90.00
Refinement procedure
Resolution32.280 - 1.750
R-factor0.204
Rwork0.203
R-free0.23500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ID 3BDC residue 34 truncated to ALA all water molecules and ligands were removed All b-factors set to 20A^2 all alternate residue conformations deleted defaulting to conformation A
RMSD bond length0.026
RMSD bond angle1.215
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.1.3)
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.580
High resolution limit [Å]1.5501.550
Rmerge0.0460.323
Number of reflections19271
<I/σ(I)>26.9
Completeness [%]93.960.1
Redundancy7.33.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP827729%(w/v) MPD, 25 mM Potassium Phosphate, Calcium Chloride (3 M eq), pdTp (2 M eq), 5.5 (mg protein)/mL in stock solution; 4uL protein stock and 4uL well solution per drop; 1-2 weeks of growth, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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