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3IJ1

Crystal structure of Eed in complex with a trimethylated histone H4K20 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths57.550, 85.321, 91.229
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.100
R-factor0.16819
Rwork0.166
R-free0.20356
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)SeMet Eed model
RMSD bond length0.009
RMSD bond angle1.209
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.180
High resolution limit [Å]2.1002.100
Rmerge0.1090.321
Number of reflections25569
<I/σ(I)>11.44.7
Completeness [%]98.999.1
Redundancy4.64.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82914M Sodium formate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K

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PDB entries from 2025-06-11

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