3I7H
Crystal Structure of DDB1 in Complex with the H-Box Motif of HBX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 173 |
Detector technology | CCD |
Collection date | 2008-05-28 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0,1.005 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 63.856, 132.860, 183.818 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.800 - 2.900 |
R-factor | 0.236 |
Rwork | 0.234 |
R-free | 0.27900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2b5m |
RMSD bond length | 0.016 |
RMSD bond angle | 1.733 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.800 | 2.980 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.101 | 0.378 |
Number of reflections | 31592 | |
<I/σ(I)> | 24.2 | 3.8 |
Completeness [%] | 95.7 | 70 |
Redundancy | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 16% PEG 4000, 0.2M SODIUM CHLORIDE, 0.1M MES, 0.005M DTT, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |