Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3I2M

The Crystal Structure of PF-8, the DNA Polymerase Accessory Subunit from Kaposi s Sarcoma-Associated Herpesvirus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Detector technologyCCD
Collection date2008-01-01
DetectorADSC QUANTUM 315
Wavelength(s).97918
Spacegroup nameP 61 2 2
Unit cell lengths58.300, 58.300, 386.920
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.150 - 2.810
R-factor0.25311
Rwork0.252
R-free0.28131
Structure solution methodSAD
RMSD bond length0.011
RMSD bond angle1.839
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwareREFMAC (5.5.0093)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.900
High resolution limit [Å]2.8002.800
Rmerge0.0950.492
Number of reflections10103
<I/σ(I)>18.0122.7
Completeness [%]95.262.1
Redundancy11.10.049
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.229518% PEG 3350, 100 mM Tris HCl pH 8.2, 0.2 M lithium chloride, and 20 mM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 295K

238268

PDB entries from 2025-07-02

PDB statisticsPDBj update infoContact PDBjnumon