3HSA
Crystal structure of pleckstrin homology domain (YP_926556.1) from SHEWANELLA AMAZONENSIS SB2B at 1.99 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-05-14 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97920 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.230, 129.490, 138.730 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.351 - 1.990 |
R-factor | 0.191 |
Rwork | 0.189 |
R-free | 0.23300 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.664 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.351 | 47.351 | 2.060 |
High resolution limit [Å] | 1.990 | 4.270 | 1.990 |
Rmerge | 0.087 | 0.040 | 0.531 |
Number of reflections | 41702 | 4423 | 4075 |
<I/σ(I)> | 10.18 | 25.6 | 2.3 |
Completeness [%] | 98.4 | 96 | 99.1 |
Redundancy | 3.61 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 5.0000% polyethylene glycol 3000, 22.0000% polyethylene glycol 400, 10.0000% Glycerol, 0.1M HEPES pH 7.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K, VAPOR DIFFUSION, SITTING DROP |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 5.0000% polyethylene glycol 3000, 22.0000% polyethylene glycol 400, 10.0000% Glycerol, 0.1M HEPES pH 7.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K, VAPOR DIFFUSION, SITTING DROP |