Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3HPE

Crystal structure of yceI (HP1286) from Helicobacter pylori

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyCCD
Collection date2009-02-18
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.8726
Spacegroup nameP 1 21 1
Unit cell lengths30.936, 61.312, 88.316
Unit cell angles90.00, 92.88, 90.00
Refinement procedure
Resolution50.300 - 2.100
R-factor0.21708
Rwork0.212
R-free0.27425
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1wub
RMSD bond length0.018
RMSD bond angle1.921
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0072)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.3002.210
High resolution limit [Å]2.1002.100
Rmerge0.1240.424
Number of reflections19367
<I/σ(I)>10.54.9
Completeness [%]99.999.9
Redundancy6.16
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.52980.1M Tris-HCl, 2M Ammonium sulfate, pH 8.5, VAPOR DIFFUSION, temperature 298K

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon