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3H8W

Structure of D132N T4 RNase H in the presence of divalent magnesium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)1.00
Spacegroup nameP 21 21 21
Unit cell lengths53.629, 74.572, 88.242
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.340 - 2.800
R-factor0.231
Rwork0.229
R-free0.28700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1TFR native T4 RNase H
RMSD bond length0.002
RMSD bond angle0.498
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.2.25)
Phasing softwareAMoRE
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.3402.950
High resolution limit [Å]2.8002.800
Rmerge0.0410.177
Total number of observations4280
Number of reflections8890
<I/σ(I)>15.34.3
Completeness [%]97.494.5
Redundancy3.63.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5295100 mM Na PIPES, 200 mM MgCl2, 14% PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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PDB entries from 2024-08-14

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