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3H5Y

Norovirus polymerase+primer/template+CTP complex at 6 mM MnCl2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2008-02-25
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97934
Spacegroup nameP 21 21 21
Unit cell lengths74.200, 93.600, 96.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.740 - 1.770
R-factor0.20615
Rwork0.204
R-free0.23870
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3bso
RMSD bond length0.008
RMSD bond angle1.091
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0066)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.970
High resolution limit [Å]1.7701.770
Rmerge0.0440.622
Number of reflections65904
<I/σ(I)>23.13.2
Completeness [%]99.9100
Redundancy6.16.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7298160 g/L PEG 8000, 250 g/L glycerol, 100 mM Tris-Cl, 50 mM KCl, 4 mM MgCl2, 6 mM MnCl2, 14 mM mercaptoethanol, 1 g/L CHAPS, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG 8000
1012Glycerol
1112Tris-HCl
1212KCl
1312MgCl2
1412MnCl2
15122-mercaptoethanol
1612CHAPS
211Glycerol
311Tris-HCl
411KCl
511MgCl2
611MnCl2
7112-mercaptoethanol
811CHAPS
912PEG 8000

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PDB entries from 2025-07-16

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