3GFY
Klebsiella pneumoniae BlrP1 with FMN and cyclic diGMP, no metal ions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 90 |
Detector technology | CCD |
Collection date | 2007-01-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.98407 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.430, 96.530, 127.070 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.560 - 2.600 |
R-factor | 0.25904 |
Rwork | 0.258 |
R-free | 0.28577 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.005 |
RMSD bond angle | 1.368 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.2.0005) |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.560 | 2.700 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.104 | 0.352 |
Number of reflections | 25028 | |
<I/σ(I)> | 13.4 | |
Completeness [%] | 96.4 | 96.4 |
Redundancy | 5.4 | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 277 | protein in 5 mM cy-diGMP, 5 mM CaCl2, 25 mM Tris-HCl pH 8.0, 40 mM NaCl, 5 mM MgCl2, 2 mM EDTA, 2 mM DTE, 5% glycerol, reservoir 0.1 M Na-Ac buffer pH 4.5, 0.2 M Ca-acetate, 17-20%PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 277K |