3GFB
L-Threonine Dehydrogenase (TkTDH) from the hyperthermophilic archaeon Thermococcus kodakaraensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-3 |
Synchrotron site | ESRF |
Beamline | ID14-3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-12-12 |
Detector | ADSC QUANTUM 4r |
Wavelength(s) | 0.931 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 124.481, 124.481, 271.143 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 73.920 - 2.400 |
R-factor | 0.22039 |
Rwork | 0.217 |
R-free | 0.27659 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dfv |
RMSD bond length | 0.034 |
RMSD bond angle | 2.772 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.920 | 2.500 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.146 | 0.590 |
Number of reflections | 84056 | |
<I/σ(I)> | 2.7 | |
Completeness [%] | 100.0 | 100 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 0.05 M sodium citrate, 2.4 M ammonium sulfate, 0.1 M sodium/potassium tartrate, 5%(v/v) glycerol and 0.1 mM zinc chloride, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |