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3GDS

Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYYF peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 3
Unit cell lengths118.822, 118.822, 118.822
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.955 - 2.850
R-factor0.21
Rwork0.209
R-free0.22100
RMSD bond length0.004
RMSD bond angle0.805
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0002.950
High resolution limit [Å]2.8506.1402.850
Rmerge0.0750.0310.540
Number of reflections13350
<I/σ(I)>31.18
Completeness [%]99.998.899.9
Redundancy9.28.87.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529850 mM Bis-Tris propane, 100 mM NaF, 5 % PEG 3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-07-10

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