3GDO
Crystal structure of putative oxidoreductase yvaA from Bacillus subtilis
Experimental procedure
| Experimental method | SAD |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2008-11-05 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 49.324, 151.309, 56.395 |
| Unit cell angles | 90.00, 107.14, 90.00 |
Refinement procedure
| Resolution | 50.000 - 2.030 |
| R-factor | 0.206 |
| Rwork | 0.204 |
| R-free | 0.24900 |
| Structure solution method | SAD |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.515 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SHELXD |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.110 |
| High resolution limit [Å] | 2.030 | 2.030 |
| Rmerge | 0.087 | 0.459 |
| Number of reflections | 49833 | |
| <I/σ(I)> | 22.131 | 2.9 |
| Completeness [%] | 98.5 | 86.8 |
| Redundancy | 6.2 | 5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.1M Tris-HCl pH 8.5, 25% PEG 3350, 0.2M MgCl2, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
